Behind the Code (technical deep-dive)

Fish Icon
Home » Blog » Behind the Code (technical deep-dive)
woman in yellowstone

When I began my internship at the Henry’s Fork Foundation (HFF), I knew I’d be working with data, but I didn’t realize how deep those waters would go. Over the summer, I’ve had the chance to build, expand, and refine some of the core data tools HFF uses to understand the Henry’s Fork and the larger Snake River system.
I know not everyone reading this is a data nerd like me, but I’d love to give you a glimpse of the work I did. I promise to keep it clear, even if some of the details sound technical!
One of my first projects was updating and expanding HFF’s real-time water quantity app. This tool takes data from stream gages and reservoirs and makes it available online for the public, anglers, and water managers. When I arrived, the app mostly focused on Henry’s Fork. My work expanded its reach to include the South Fork of the Snake River and the Snake River headwaters. This meant writing scripts to automatically pull in new data sources, clean them, and link them to the app’s database. It may not sound glamorous, but it means more people can see, in real-time, how water is moving across the basin. And for a watershed where timing and quantity are everything, that kind of access is powerful.

A snippet of what expanded watershed on the web app would look like.

After the real-time work, I shifted to a much deeper task: building what I started calling my “scratch reader” — a daily climate data reader that pulls together records from dozens of stations, some going back to 1971.
This was harder than it sounds. Many of the datasets had issues:
– Negative daily precipitation (DP) values that needed to be corrected.
– Mismatched precipitation and temperature data across stations.
– Missing stretches of climate data that had to be estimated from nearby stations.
An example of fixing one of these issues was, I wrote scripts that:
– Checked for missing or impossible values,
– Paired stations together based on correlations (using SNOTEL and other sources), and
– Filled gaps using linear regression models, cascading through first-, second-, and third-choice reference stations.
By the end, I had created a complete, bias-corrected dataset covering over 40 stations, stretching from the 1970s to the present. This work will hopefully now feed into HFF’s daily water report models — making them stronger, more reliable, and more reflective of long-term climate.

Some of my other detailed work involved temperature and evapotranspiration (ET) data, and a lot of time was spent correcting and filling in missing records.
For example: Developed methods with my mentor to fill precipitation (AP/DP) values year by year, sometimes reaching back to 1989–2006 for stations like Grand Targhee.
It might sound like a tangle of scripts and CSV files (and sometimes it felt that way), but the outcome was simple: turning incomplete, messy climate histories into usable, trustworthy records.

The Henry’s Fork Foundation has long relied on data to guide water management and conservation. The work I did this summer ensures that the models HFF runs each day are backed by decades of climate history — not just today’s conditions. That means better forecasts, more informed management, and a stronger foundation for science-driven decisions in the watershed.
For me, it also showed how much persistence data science takes. Debugging, checking correlations, re-running models — it’s a lot like wading through a river. You have to keep moving, even when the current pushes back.

 

Can’t forget my first wading experience!
Collecting data from the logger.

 

 

 

 

 

 

 

 

 

 

 

 

Of course, this internship wasn’t only about code. The people I worked with, my fellow interns, HFF staff, and especially Dr. Rob Van Kirk, made this experience incredibly meaningful.
As the summer went on, one by one the other interns finished their projects and headed home. I’m wrapping up a week later, with the intern suite strangely quiet. Saying goodbye wasn’t easy, especially after all the shared adventures, from hiking Packsaddle Lake to sandboarding at the St. Anthony dunes.
It’s bittersweet to leave both the friends I made and the Idaho waters I’ve come to love. But just like the datasets I worked on, I feel like these experiences will stay with me long after the gaps are filled.

At the Sand Dunes..
At Packsaddle Lake.
Facebook
LinkedIn
Pinterest

Recent Posts

General
Jamie Powell

FAQ: Pilot Relocation of Wild Rainbows

Q: What does “relocation” mean? A: Relocation means carefully moving wild trout from one part of our watershed to another under IDFG oversight. It is not hatchery stocking — these are wild fish from the same original lineage as the Henry’s Fork rainbows. Q: What are the benefits of this approach? A: The possibility for an immediate bump in angling opportunity, and high transport survival, based on past efforts (~98%). Q: Why are you doing

Read More »
Fishing
Jamie Powell

Pilot Relocation of Wild Rainbows Demonstrates Adaptive Science to Strengthen the Henry’s Fork Fishery

In a first-of-its-kind adaptive science effort for the Henry’s Fork, the Idaho Department of Fish and Game (IDFG) and Henry’s Fork Foundation (HFF) are launching a pilot project this October to evaluate whether small-scale relocation of wild Rainbow Trout can strengthen long-term fishery resilience. On the South Fork, a small number of Rainbow Trout are being relocated as part of IDFG efforts to suppress Rainbow Trout abundance by 30% to benefit native Yellowstone Cutthroat Trout

Read More »
Image of a lake
Water Quality
Jasper Davis

Turbidity FAQ – Fall 2025

What is the current climate like in the Henry’s Fork Watershed? We have seen warmer temperatures and less water as a whole in water year 2025. *2025 is currently tied with 2016 for the 4th warmest water year in the 37-year record and the 5th warmest spring and summer in that record. *The total precipitation so far for water year 2025 is 15% less than average. *Precipitation since April 1, 2025, is the 3rd lowest

Read More »
Image of goat on Harriman display table
Intern
Ella Paini

On the Trail, Part II: Sunscreen, Goats, and Goodbyes

I apologize for being a bit late with this post. In my defense, I was busy wrapping up the summer and my internship with the Henry’s Fork Foundation and Friends of Harriman. Part I of this blog was about rejection. Part II is about everything else: small lessons, strange encounters, and the bittersweet feeling of closing a chapter. This internship was educational in unexpected ways, and I learned a few things: Wear sunscreen. Always. Even

Read More »